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Early type I Interferon response induces upregulation of human β-defensin 1 during acute HIV-1 infection

Corleis, Björn, Antonella C. Lisanti, Christian Körner, Abigail E. Schiff, Eric S. Rosenberg, Todd M. Allen, Marcus Altfeld, and Douglas S. Kwon. 2017. “Early type I Interferon response induces upregulation of human β-defensin 1 during acute HIV-1 infection.” PLoS ONE 12 (3): e0173161. doi:10.1371/journal.pone.0173161. http://dx.doi.org/10.1371/journal.pone.0173161. [Peer Reviewed Journal]

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PD-1 Blockade in Chronically HIV-1-Infected Humanized Mice Suppresses Viral Loads

Seung, Edward, Timothy E. Dudek, Todd M. Allen, Gordon J. Freeman, Andrew D. Luster, and Andrew M. Tager. 2013. “PD-1 Blockade in Chronically HIV-1-Infected Humanized Mice Suppresses Viral Loads.” PLoS ONE 8 (10): e77780. doi:10.1371/journal.pone.0077780. http://dx.doi.org/10.1371/journal.pone.0077780. [Peer Reviewed Journal]

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Increased breadth and depth of cytotoxic T lymphocytes responses against HIV-1-B Nef by inclusion of epitope variant sequences

PLoS ONE, 01 March 2011, Vol.6(3), p.e17969 [Peer Reviewed Journal]

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A novel immunodominant CD8+ T cell response restricted by a common HLA-C allele targets a conserved region of Gag HIV-1 clade CRF01_AE infected Thais

PLoS ONE, 01 January 2011, Vol.6(8), p.e23603 [Peer Reviewed Journal]

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Use of Dried Blood Spots to Elucidate Full-Length Transmitted/Founder HIV-1 Genomes

Pathogens and Immunity, 01 July 2016, Vol.1(1), pp.129-153 [Peer Reviewed Journal]

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Highly Sensitive and Specific Detection of Rare Variants in Mixed Viral Populations from Massively Parallel Sequence Data

Macalalad, Alexander R., Michael C. Zody, Patrick Charlebois, Niall J. Lennon, Ruchi M. Newman, Christine M. Malboeuf, Elizabeth M. Ryan, et al. 2012. Highly sensitive and specific detection of rare variants in mixed viral populations from massively parallel sequence data. PLoS Computational Biology 8(3): e1002417. [Peer Reviewed Journal]

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Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus

Tully, D. C., C. B. Ogilvie, R. E. Batorsky, D. J. Bean, K. A. Power, M. Ghebremichael, H. E. Bedard, et al. 2016. “Differences in the Selection Bottleneck between Modes of Sexual Transmission Influence the Genetic Composition of the HIV-1 Founder Virus.” PLoS Pathogens 12 (5): e1005619. doi:10.1371/journal.ppat.1005619. http://dx.doi.org/10.1371/journal.ppat.1005619. [Peer Reviewed Journal]

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Impact of Pre-adapted HIV Transmission

Carlson, J. M., V. Y. Du, N. Pfeifer, A. Bansal, V. Y. Tan, K. Power, C. J. Brumme, et al. 2016. “Impact of Pre-adapted HIV Transmission.” Nature medicine 22 (6): 606-613. doi:10.1038/nm.4100. http://dx.doi.org/10.1038/nm.4100. [Peer Reviewed Journal]

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Whole Genome Deep Sequencing of HIV-1 Reveals the Impact of Early Minor Variants Upon Immune Recognition During Acute Infection

Henn, Matthew R., Christian L. Boutwell, Patrick Charlebois, Niall J. Lennon, Karen A. Power, Alexander R. Macalalad, Aaron M. Berlin, et al. 2012. Whole genome deep sequencing of HIV-1 reveals the impact of early minor variants upon immune recognition during acute infection. PLoS Pathogens 8(3): e1002529. [Peer Reviewed Journal]

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Lower Broadly Neutralizing Antibody Responses in Female Versus Male HIV-1 Infected Injecting Drug Users

Viruses, 2019, Vol.11(4), pp.urn:issn:1999-4915 [Peer Reviewed Journal]

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